.. _api:

===
API
===

++++++++++++
Prepocessing
++++++++++++

.. automodule:: transcov
   :members: preprocess

++++++++++
Generators
++++++++++

.. automodule:: transcov
   :members: generate_coverage_matrix, generate_read_ends_matrix, generate_length_matrix, generate_end_length_tensor,

+++++++++++++
Manipulations
+++++++++++++

.. automodule:: transcov
   :members: collapse, pick_subset, cut_tails_left, cut_tails_right, cut_tails_both