.. _introduction:

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Introduction
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Transcov is a bioinformatics software for mapping coverage around Transcription Start Sites (TSS’). Transcov aims to solve the following needs:

* Extract data from bam files

* Build a suitable data structure

* Manipulating the data structure, like aggregating across samples

* Explore coverage around TSS’.

Motivation
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Why this module came to live?

Workflow and Data structure
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How is it structured and what does the data structure looks like?